Publications

Cognition spaces: natural, artificial, and hybrid

R Solé, LF Seoane, J Pla-Mauri, MT Bennett, ME Hochberg, M Levin

arXiv preprint arXiv:2601.12837, 2026

Cited by 7

Emergent Bioengineering

V Maull, Y Shpilkina, V de Lorenzo, R Solé

Preprints, 2026

Engineering Basal Cognition: Minimal Genetic Circuits for Habituation, Sensitization, and Massed–Spaced Learning

J Pla-Mauri, R Solé

ACS Synthetic Biology 15 (2), 716-727, 2026

A smartphone analogy to explore the origin of animals

I Ruiz-Trillo, E Casacuberta, NH Brown, R Solé

The EMBO Journal, 1-13, 2026

Causes and consequences of disordered hyperuniformity in global drylands

W Hu, L Cui, M Delgado-Baquerizo, R Solé, S Kéfi, M Berdugo, N Xu, ...

Proceedings of the National Academy of Sciences 122 (41), e2504496122, 2025

Cited by 6

Bifurcations and phase transitions in the origins of life

R Solé, M De Domenico

Philosophical Transactions of the Royal Society B: Biological Sciences 380 …, 2025

Cited by 5

Origins of life: the possible and the actual

R Solé, C Kempes, S Stepney

Philosophical Transactions of the Royal Society B: Biological Sciences 380 …, 2025

Cited by 3

Synthetic Horizontal Gene Transfer for Ecosystem Restoration

V Maull, G Aguadé-Gorgorió, V de Lorenzo, R Solé

bioRxiv, 2025.09. 23.678013, 2025

Cited by 2

Cognition as least action: the Physarum Lagrangian

R Solé, J Pla-Mauri

arXiv preprint arXiv:2511.08531, 2025

Cited by 1

Neutral theory of cooperative dynamics

J Piñero, A Kolchinsky, S Redner, R Solé

Proceedings of the National Academy of Sciences 122 (51), e2515423122, 2025

Metabolic fluctuations explain allometric scaling diversity

A Tabi, W Merbis, FAN Santos, R Solé

bioRxiv, 2025.11. 06.686202, 2025

Geometric phase in the Crow-Kimura model of molecular evolution on dynamic environments

V Suvorov, R Solé, DB Saakian

Physical Review E 112 (5), 054409, 2025

Supplementary Material: A Minimal Genetic Circuit for Cellular Anticipation

J Pla-Mauri, RV Solé

Figshare, 2025

Eco-Evo-Devox: A Modular Artificial Life Platform for Studying the Ecological and Developmental Roots of Neural Evolution

E Plantec, S Risi, R Solé

Artificial Life Conference Proceedings 37 2025 (1), 72, 2025

A minimal genetic circuit for cellular anticipation

J Pla-Mauri, R Solé

Journal of the Royal Society Interface 22 (231), 2025

Linking power, efficiency, and bifurcations in consumer–resource systems

S Saavedra, Y Yang, CP Kempes, C Long, R Solé, T Yoshino, MT Angulo

bioRxiv, 2025.07. 14.664758, 2025

Self-organization as a mechanism of resilience in dryland ecosystems

S Kéfi, A Génin, A Garcia-Mayor, E Guirado, JS Cabral, M Berdugo, ...

Proceedings of the National Academy of Sciences 121 (6), e2305153121, 2024

Cited by 69

Fundamental constraints to the logic of living systems

R Solé, CP Kempes, B Corominas-Murtra, M De Domenico, A Kolchinsky, ...

Interface Focus 14 (5), 2024

Cited by 48

Modeling tumors as complex ecosystems

G Aguadé-Gorgorió, ARA Anderson, R Solé

iScience, 2024

Cited by 23

Structured community transitions explain the switching capacity of microbial systems

C Long, J Deng, J Nguyen, YY Liu, EJ Alm, R Solé, S Saavedra

Proceedings of the National Academy of Sciences 121 (6), e2312521121, 2024

Cited by 23

Open problems in synthetic multicellularity

R Solé, N Conde–Pueyo, J Pla–Mauri, J Garcia–Ojalvo, N Montserrat, ...

NPJ systems biology and applications 10 (1), 151, 2024

Cited by 16

Optimization of nonequilibrium free energy harvesting illustrated on bacteriorhodopsin

J Piñero, R Solé, A Kolchinsky

Physical Review Research 6 (1), 013275, 2024

Cited by 14

A synthetic microbial Daisyworld: planetary regulation in the test tube

V Maull, J Pla Mauri, N Conde Pueyo, R Solé

Journal of The Royal Society Interface 21 (211), 2024

Cited by 11

Cooperative control of environmental extremes by artificial intelligent agents

M Sánchez-Fibla, C Moulin-Frier, R Solé

Journal of the Royal Society Interface 21 (220), 2024

Cited by 8

The development of ecological systems along paths of least resistance

J Deng, OX Cordero, T Fukami, SA Levin, RM Pringle, R Solé, ...

Current Biology 34 (20), 4813-4823. e14, 2024

Cited by 8

Nonequilibrium dynamics in conservation biology: Scales, attractors and critical points

R Sole

Biological conservation 294, 110601, 2024

Cited by 6

Biodiversity as a firewall to engineered microbiomes for Restoration and Conservation

V Maull, R Sole

Phil. Trans. R Soc. B 11, 231526, 2024

Cited by 6

Synthetic ecosystems: from the test tube to the biosphere

R Solé, V Maull, DR Amor, JP Mauri, CP Núria

ACS Synthetic Biology 13 (12), 3812-3826, 2024

Cited by 5

The morphospace of consciousness: Three kinds of complexity for minds and machines

XD Arsiwalla, R Solé, C Moulin-Frier, I Herreros, M Sánchez-Fibla, ...

NeuroSci 4 (2), 79-102, 2023

Cited by 42

How Turing parasites expand the computational landscape of digital life

LF Seoane, R Solé

Physical Review E 108 (4), 044407, 2023

Cited by 13

An oncospace for human cancers

G Aguadé‐Gorgorió, J Costa, R Solé

BioEssays 45 (5), 2200215, 2023

Cited by 11

Do plants have the cognitive complexity for sentience?

RV Solé

Animal Sentience 8 (33), 18, 2023

Cited by 6

Ecological mechanisms underlying aridity thresholds in global drylands

M Berdugo, B Vidiella, RV Solé, FT Maestre

Functional Ecology 36 (1), 4-23, 2022

Cited by 161

Revisiting Leigh Van Valen’s “A new evolutionary law”(1973)

R Solé

Biological Theory 17 (2), 120-125, 2022

Cited by 63

Ecological complexity and the biosphere: the next 30 years

R Solé, S Levin

Philosophical Transactions of the Royal Society B: Biological Sciences 377 …, 2022

Cited by 61

Evolution of brains and computers: The roads not taken

R Solé, LF Seoane

Entropy 24 (5), 665, 2022

Cited by 21

Transition therapy: tackling the ecology of tumor phenotypic plasticity

G Aguadé-Gorgorió, S Kauffman, R Solé

Bulletin of mathematical biology 84 (1), 24, 2022

Cited by 21

Network-level containment of single-species bioengineering

V Maull, R Solé

Philosophical Transactions of the Royal Society B: Biological Sciences 377 …, 2022

Cited by 15

Unicellular–multicellular evolutionary branching driven by resource limitations

A Bonforti, R Solé

Journal of The Royal Society Interface 19 (191), 2022

Cited by 14

Ecological firewalls for synthetic biology

B Vidiella, R Solé

Iscience 25 (7), 2022

Cited by 11

Fixation and fluctuations in two-species cooperation

J Piñero, S Redner, R Solé

Journal of Physics: Complexity 3 (1), 015011, 2022

Cited by 5

The planetary wellbeing initiative: pursuing the sustainable development goals in higher education

JM Antó, JL Martí, J Casals, P Bou-Habib, P Casal, M Fleurbaey, ...

Sustainability 13 (6), 3372, 2021

Cited by 78

Engineering self-organized criticality in living cells

A Guillamon, J Sardanyes, V Maull, NC Pueyo, R Sole

Nature Communications, 2021

Cited by 39

Synthetic lateral inhibition in periodic pattern forming microbial colonies

S Duran-Nebreda, J Pla, B Vidiella, J Piñero, N Conde-Pueyo, R Solé

ACS Synthetic Biology 10 (2), 277-285, 2021

Cited by 34

The ecology of cancer differentiation therapy

R Solé, G Aguadé-Gorgorió

Journal of theoretical biology 511, 110552, 2021

Cited by 26

Phase transitions in virology

R Solé, J Sardanyés, SF Elena

Reports on Progress in Physics 84 (11), 115901, 2021

Cited by 20

Why can the brain (and not a computer) make sense of the liar paradox?

P Fraser, R Solé, G De las Cuevas

Frontiers in Ecology and Evolution 9, 802300, 2021

Cited by 4

Global ecosystem thresholds driven by aridity

M Berdugo, M Delgado-Baquerizo, S Soliveres, R Hernández-Clemente, ...

Science 367 (6479), 787-790, 2020

Cited by 1246

Synthetic biology for terraformation lessons from mars, earth, and the microbiome

N Conde-Pueyo, B Vidiella, J Sardanyés, M Berdugo, FT Maestre, ...

life 10 (2), 14, 2020

Cited by 59

Evolving complexity: how tinkering shapes cells, software and ecological networks

R Solé, S Valverde

Philosophical Transactions of the Royal Society B: Biological Sciences 375 …, 2020

Cited by 32

Tumour neoantigen heterogeneity thresholds provide a time window for combination immunotherapy

G Aguadé-Gorgorió, R Solé

Journal of the Royal Society Interface 17 (171), 2020

Cited by 23

Synthetic soil crusts against green-desert transitions: a spatial model

B Vidiella, J Sardanyés, RV Solé

Royal Society open science 7 (8), 2020

Cited by 22

Ageing, computation and the evolution of neural regeneration processes

A Ollé-Vila, LF Seoane, R Solé

Journal of the Royal Society Interface 17 (168), 2020

Cited by 12

Dynamics in a time-discrete food-chain model with strong pressure on preys

L Alseda, B Vidiella, R Solé, JT Lázaro, J Sardanyés

Communications in nonlinear science and numerical simulation 84, 105187, 2020

Cited by 11

Using information theory to decode network coevolution

R Solé

Science 368 (6497), 1315-1316, 2020

Cited by 7

Criticality in pareto optimal grammars?

LF Seoane, R Solé

Entropy 22 (2), 165, 2020

Cited by 6

Modeling brain reorganization after hemispherectomy

LF Seoane, R Solé

bioRxiv, 2020.12. 25.424412, 2020

Cited by 5

Liquid brains, solid brains

R Solé, M Moses, S Forrest

Philosophical Transactions of the Royal Society B: Biological Sciences 374 …, 2019

Cited by 141

Statistical physics of liquid brains

J Piñero, R Solé

Philosophical Transactions of the Royal Society B: Biological Sciences 374 …, 2019

Cited by 50

Genetic instability as a driver for immune surveillance

G Aguadé-Gorgorió, R Solé

Journal for immunotherapy of cancer 7 (1), 345, 2019

Cited by 30

Habitat loss‐induced tipping points in metapopulations with facilitation

J Sardanyés, J Piñero, R Solé

Population Ecology 61 (4), 436-449, 2019

Cited by 22

Protocell cycles as thermodynamic cycles

B Corominas-Murtra, H Fellermann, R Solé

The Interplay between Thermodynamics and Computation in Natural and …, 2019

Cited by 2

The architecture of mutualistic networks as an evolutionary spandrel

S Valverde, J Piñero, B Corominas-Murtra, J Montoya, L Joppa, R Solé

Nature ecology & evolution 2 (1), 94-99, 2018

Cited by 87

Viruses as complex adaptive systems

R Solé, SF Elena

Princeton University Press, 2018

Cited by 62

Zipf’s Law, unbounded complexity and open-ended evolution

B Corominas-Murtra, LF Seoane, R Solé

Journal of the Royal Society Interface 15 (149), 2018

Cited by 49

Information theory, predictability and the emergence of complex life

LF Seoane, RV Solé

Royal Society open science 5 (2), 2018

Cited by 42

The morphospace of language networks

LF Seoane, R Solé

Scientific reports 8 (1), 10465, 2018

Cited by 41

Exploiting delayed transitions to sustain semiarid ecosystems after catastrophic shifts

B Vidiella, J Sardanyés, R Solé

Journal of The Royal Society Interface 15 (143), 2018

Cited by 31

Population dynamics of synthetic terraformation motifs

RV Solé, R Montañez, S Duran-Nebreda, D Rodriguez-Amor, B Vidiella, ...

Royal Society Open Science 5 (7), 2018

Cited by 24

The road to synthetic multicellularity

R Solé, A Ollé-Vila, B Vidiella, S Duran-Nebreda, N Conde-Pueyo

Current Opinion in Systems Biology 7, 60-67, 2018

Cited by 23

Adaptive dynamics of unstable cancer populations: The canonical equation

G Aguadé‐Gorgorió, R Solé

Evolutionary applications 11 (8), 1283-1292, 2018

Cited by 20

Nonequilibrium entropic bounds for Darwinian replicators

J Piñero, R Solé

Entropy 20 (2), 98, 2018

Cited by 11

Chromatic transitions in the emergence of syntax networks

B Corominas-Murtra, M Sànchez Fibla, S Valverde, R Solé

Royal Society open science 5 (12), 2018

Cited by 7

Ultrasound approach tracks gut microbes

R Solé, N Conde-Pueyo

Nature 553 (7686), 36-37, 2018

Cited by 7

Microbial biotechnology as a tool to restore degraded drylands

FT Maestre, R Sole, BK Singh

Microbial biotechnology 10 (5), 1250-1253, 2017

Cited by 71

Spatial dynamics of synthetic microbial mutualists and their parasites

DR Amor, R Montañez, S Duran-Nebreda, R Solé

PLOS Computational Biology 13 (8), e1005689, 2017

Cited by 56

Synthetic associative learning in engineered multicellular consortia

J Macia, B Vidiella, RV Solé

Journal of The Royal Society Interface 14 (129), 2017

Cited by 51

Abrupt transitions to tumor extinction: a phenotypic quasispecies model

J Sardanyés, R Martínez, C Simó, R Solé

Journal of Mathematical Biology 74 (7), 1589-1609, 2017

Cited by 14

The paradox of constant oceanic plastic debris: evidence for evolved microbial biodegradation?

R Solé, E Fontich, B Vidiella, S Duran-Nebreda, R Montañez, J Pinero, ...

BioRxiv, 135582, 2017

Cited by 12

Rise of the humanbot

R Sole

arXiv preprint arXiv:1705.05935, 2017

Cited by 7

Synthetic collective intelligence

R Solé, DR Amor, S Duran-Nebreda, N Conde-Pueyo, ...

Biosystems 148, 47-61, 2016

Cited by 94

Implementation of complex biological logic circuits using spatially distributed multicellular consortia

J Macia, R Manzoni, N Conde, A Urrios, E de Nadal, R Solé, F Posas

PLoS computational biology 12 (2), e1004685, 2016

Cited by 92

A morphospace for synthetic organs and organoids: the possible and the actual

A Ollé-Vila, S Duran-Nebreda, N Conde-Pueyo, R Montañez, R Solé

Integrative Biology 8 (4), 485-503, 2016

Cited by 77

A synthetic multicellular memory device

A Urrios, J Macia, R Manzoni, N Conde, A Bonforti, E de Nadal, F Posas, ...

ACS synthetic biology 5 (8), 862-873, 2016

Cited by 72

Bioremediation at a global scale: from the test tube to planet Earth

V de Lorenzo, P Marliere, R Sole

Microbial biotechnology 9 (5), 618-625, 2016

Cited by 71

Synthetic transitions: towards a new synthesis

R Solé

Philosophical Transactions of the Royal Society B: Biological Sciences 371 …, 2016

Cited by 71

Emergence of proto-organisms from bistable stochastic differentiation and adhesion

S Duran-Nebreda, A Bonforti, R Montanez, S Valverde, R Solé

Journal of The Royal Society Interface 13 (117), 2016

Cited by 23

On singularities and black holes in combination-driven models of technological innovation networks

R Solé, DR Amor, S Valverde

Plos one 11 (1), e0146180, 2016

Cited by 19

Toward synthetic spatial patterns in engineered cell populations with chemotaxis

S Duran-Nebreda, RV Solé

ACS synthetic biology 5 (7), 654-661, 2016

Cited by 11

The software crisis of synthetic biology

S Valverde, M Porcar, J Peretó, RV Solé

BioRxiv, 041640, 2016

Cited by 11

Network morphospace

A Avena-Koenigsberger, J Goñi, R Solé, O Sporns

Journal of the Royal Society Interface 12 (103), 2015

Cited by 126

Punctuated equilibrium in the large-scale evolution of programming languages

S Valverde, RV Solé

Journal of The Royal Society Interface 12 (107), 2015

Cited by 90

Bioengineering the biosphere?

R Solé

Ecological Complexity 22, 40-49, 2015

Cited by 64

Synthetic circuit designs for earth terraformation

RV Solé, R Montañez, S Duran-Nebreda

Biology Direct 10 (1), 37, 2015

Cited by 61

Phase transitions in Pareto optimal complex networks

LF Seoane, R Solé

Physical Review E 92 (3), 032807, 2015

Cited by 60

Emergence of multicellularity in a model of cell growth, death and aggregation under size-dependent selection

S Duran-Nebreda, R Solé

Journal of the Royal Society Interface 12 (102), 2015

Cited by 33

Emergent chemical behavior in variable-volume protocells

B Shirt-Ediss, RV Solé, K Ruiz-Mirazo

Life 5 (1), 181-211, 2015

Cited by 30

Evolutionary transitions to multicellular life

RV Solé

(No Title), 245, 2015

Cited by 25

Computational implementation of a tunable multicellular memory circuit for engineered eukaryotic consortia

J Sardanyés, A Bonforti, N Conde, R Solé, J Macia

Frontiers in physiology 6, 281, 2015

Cited by 22

External morphology explains the success of biological invasions

E Azzurro, VM Tuset, A Lombarte, F Maynou, D Simberloff, ...

Ecology letters 17 (11), 1455-1463, 2014

Cited by 158

How to Make a Synthetic Multicellular Computer

J Macia, R Solé

PLOS ONE 9, e81248, 2014

Cited by 53

Ambiguity in language networks

RV Solé, LF Seoane

arXiv preprint arXiv:1402.4802, 2014

Cited by 43

Modelling lipid competition dynamics in heterogeneous protocell populations

B Shirt-Ediss, K Ruiz-Mirazo, F Mavelli, RV Solé

Scientific Reports 4 (1), 5675, 2014

Cited by 36

Design principles of stripe-forming motifs: the role of positive feedback

A Munteanu, J Cotterell, RV Solé, J Sharpe

Scientific reports 4 (1), 5003, 2014

Cited by 32

Towards a mathematical theory of meaningful communication

B Corominas-Murtra, J Fortuny, RV Solé

Scientific reports 4 (1), 4587, 2014

Cited by 32

A bottom-up characterization of transfer functions for synthetic biology designs: lessons from enzymology

M Carbonell-Ballestero, S Duran-Nebreda, R Montanez, R Solé, J Macía, ...

Nucleic acids research 42 (22), 14060-14069, 2014

Cited by 31

Can a minimal replicating construct be identified as the embodiment of cancer?

RV Solé, S Valverde, C Rodriguez‐Caso, J Sardanyés

Bioessays 36 (5), 503-512, 2014

Cited by 21

Variability in mutational fitness effects prevents full lethal transitions in large quasispecies populations

J Sardanyés, C Simó, R Martínez, RV Solé, SF Elena

Scientific reports 4 (1), 4625, 2014

Cited by 17

Red Queen coevolution on fitness landscapes

RV Solé, J Sardanyés

Recent advances in the theory and application of fitness landscapes, 301-338, 2014

Cited by 15

Catastrophic shifts and lethal thresholds in a propagating front model of unstable tumor progression

DR Amor, RV Solé

Physical Review E 90 (2), 022710, 2014

Cited by 11

Biocircuits in synchrony

R Solé, J Macía

Nature 508 (7496), 326-327, 2014

Cited by 5

On the origins of hierarchy in complex networks

B Corominas-Murtra, J Goñi, RV Sole, C Rodriguez-Caso

Proceedings of the National Academy of Sciences 110 (33), 13316-13321, 2013

Cited by 250

The evolutionary ecology of technological innovations

RV Solé, S Valverde, M Rosas-Casals, SA Kauffman, D Farmer, ...

Complexity 18, 15-27, 2013

Cited by 189

Expanding the landscape of biological computation with synthetic multicellular consortia

RV Solé, J Macia

Natural Computing 12 (4), 485-497, 2013

Cited by 40

A multiobjective optimization approach to statistical mechanics

LF Seoane, RV Solé

arXiv preprint arXiv:1310.6372, 2013

Cited by 28

Before the endless forms: embodied model of transition from single cells to aggregates to ecosystem engineering

RV Solé, S Valverde

PLOS ONE, 2013

Cited by 18

Lenguaje, redes y evolución

RV Solé, BC Murtra, J Fortuny

Investigación y ciencia, 2013

Cited by 17

Accelerated tumor invasion under non-isotropic cell dispersal in glioblastomas

J Fort, RV Sole

New Journal of Physics 15 (5), 055001, 2013

Cited by 11

Macroevolution in silico: scales, constraints and universals

RV Sole, S Valverde

Paleontology, 2013

Cited by 10

Distributed computation: the new wave of synthetic biology devices

J Macía, F Posas, RV Solé

Trends in biotechnology 30 (6), 342-349, 2012

Cited by 111

The causes of epistasis in genetic networks

J Macía, RV Solé, SF Elena

Evolution 66 (2), 586-596, 2012

Cited by 31

Evolvability of feed-forward loop architecture biases its abundance in transcription networks

S Widder, R Solé, J Macía

BMC systems biology 6 (1), 7, 2012

Cited by 27

Vidas sinteticas

R Solé

Tusquets Metatemas ISBN: 978-84-8383-392-6, 2012

Cited by 18

Distributed biological computation with multicellular engineered networks

S Regot, J Macia, N Conde, K Furukawa, J Kjellén, T Peeters, S Hohmann, ...

Nature 469 (7329), 207-211, 2011

Cited by 478

Phase transitions

R Sole

Princeton University Press, 2011

Cited by 334

Analysis of major failures in Europe’s power grid

M Rosas-Casals, R Solé

International Journal of Electrical Power & Energy Systems 33 (3), 805-808, 2011

Cited by 83

Tempo and mode of plant RNA virus escape from RNA interference-mediated resistance

G Lafforgue, F Martínez, J Sardanyés, F De La Iglesia, QW Niu, SS Lin, ...

Journal of virology 85 (19), 9686-9695, 2011

Cited by 76

Emergence of Zipf’s law in the evolution of communication

B Corominas-Murtra, J Fortuny, RV Solé

Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 83 (3 …, 2011

Cited by 73

Modeling the effector-regulatory T cell cross-regulation reveals the intrinsic character of relapses in Multiple Sclerosis

N Vélez de Mendizábal, J Carneiro, RV Solé, J Goñi, J Bragard, ...

BMC Systems Biology 5 (1), 114, 2011

Cited by 53

Convergent evolutionary paths in biological and technological networks

RV Solé, S Valverde, C Rodriguez-Caso

Evolution: Education and Outreach 4 (3), 415-426, 2011

Cited by 32

Measuring the hierarchy of feedforward networks

B Corominas-Murtra, C Rodríguez-Caso, J Goni, R Solé

Chaos: An Interdisciplinary Journal of Nonlinear Science 21 (1), 2011

Cited by 27

Language networks: Their structure, function, and evolution

RV Solé, B Corominas‐Murtra, S Valverde, L Steels

Complexity 15 (6), 20-26, 2010

Cited by 646

Universality of Zipf’s law

B Corominas-Murtra, RV Solé

Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 82 (1 …, 2010

Cited by 114

On nestedness in ecological networks

LN Joppa, JM Montoya, RV Solé, J Sanderson, SL Pimm

Evolutionary Ecology, 2010

Cited by 112

Diversity, competition, extinction: the ecophysics of language change

RV Solé, B Corominas-Murtra, J Fortuny

Journal of The Royal Society Interface 7 (53), 1647-1664, 2010

Cited by 96

Simple genomes, complex interactions: epistasis in RNA virus

SF Elena, RV Solé, J Sardanyés

Chaos: An Interdisciplinary Journal of Nonlinear Science 20 (2), 2010

Cited by 88

When metabolism meets topology: Reconciling metabolite and reaction networks

R Montanez, MA Medina, RV Sole, C Rodríguez‐Caso

Bioessays 32 (3), 246-256, 2010

Cited by 66

Simple model of recovery dynamics after mass extinction

RV Solé, J Saldaña, JM Montoya, DH Erwin

Journal of Theoretical Biology 267 (2), 193-200, 2010

Cited by 58

Genome size, self‐organization and DNA's dark matter

RV Solé

Complexity 16 (1), 20-23, 2010

Cited by 33

Avoiding transcription factor competition at promoter level increases the chances of obtaining oscillation

A Munteanu, M Constante, M Isalan, RV Solé

BMC systems biology 4 (1), 66, 2010

Cited by 25

Exploring the randomness of directed acyclic networks

J Goñi, B Corominas-Murtra, RV Solé, C Rodríguez-Caso

Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 82 (6 …, 2010

Cited by 16

Topological reversibility and causality in feed-forward networks

B Corominas-Murtra, C Rodríguez-Caso, J Goñi, R Solé

New Journal of Physics 12 (11), 113051, 2010

Cited by 10

Redes complejas

R Solé

Del genoma a internet. Barcelona: Tusquets Editores, 19-22, 2009

Cited by 265

The topology of drug–target interaction networks: implicit dependence on drug properties and target families

J Mestres, E Gregori-Puigjané, S Valverde, RV Solé

Molecular BioSystems 5 (9), 1051-1057, 2009

Cited by 258

Press perturbations and indirect effects in real food webs

JM Montoya, G Woodward, MC Emmerson, RV Solé

Ecology 90 (9), 2426-2433, 2009

Cited by 251

Dynamic signaling in the Hog1 MAPK pathway relies on high basal signal transduction

J Macia, S Regot, T Peeters, N Conde, R Solé, F Posas

Science signaling 2 (63), ra13-ra13, 2009

Cited by 171

The ontogeny of scale-free syntax networks: phase transitions in early language acquisition

B Corominas-Murtra, S Valverde, R Sole

Advances in Complex Systems 12 (03), 371-392, 2009

Cited by 130

Evolution and self-assembly of protocells

RV Sole

The international journal of biochemistry & cell biology 41 (2), 274-284, 2009

Cited by 89

Human synthetic lethal inference as potential anti-cancer target gene detection

N Conde-Pueyo, A Munteanu, RV Solé, C Rodríguez-Caso

BMC Systems Biology 3 (1), 116, 2009

Cited by 64

Replication mode and landscape topology differentially affect RNA virus mutational load and robustness

J Sardanyés, RV Solé, SF Elena

Journal of virology 83 (23), 12579-12589, 2009

Cited by 64

Why are cellular switches Boolean? General conditions for multistable genetic circuits

J Macía, S Widder, R Solé

Journal of theoretical biology 261 (1), 126-135, 2009

Cited by 64

Distributed robustness in cellular networks: insights from synthetic evolved circuits

J Macia, RV Solé

Journal of the Royal Society Interface 6 (33), 393-400, 2009

Cited by 62

Reciprocal specialization in ecological networks

LN Joppa, J Bascompte, JM Montoya, RV Solé, J Sanderson, SL Pimm

Ecology letters 12 (9), 961-969, 2009

Cited by 57

Specialized or flexible feed-forward loop motifs: a question of topology

J Macía, S Widder, R Solé

BMC systems biology 3 (1), 84, 2009

Cited by 45

On the basic computational structure of gene regulatory networks

C Rodriguez-Caso, B Corominas-Murtra, RV Solé

Molecular BioSystems 5 (12), 1617-1629, 2009

Cited by 44

Monomeric bistability and the role of autoloops in gene regulation

S Widder, J Macía, R Solé

PloS One 4 (4), e5399, 2009

Cited by 28

Percolation in insect nest networks: evidence for optimal wiring

S Valverde, B Corominas-Murtra, A Perna, P Kuntz, G Theraulaz, RV Solé

Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 79 (6 …, 2009

Cited by 18

Motifs in graphs

S Valverde, RV Solé

Encyclopedia of Complexity and Systems Science, 5692-5702, 2009

Cited by 4

Robustness of the European power grids under intentional attack

RV Solé, M Rosas-Casals, B Corominas-Murtra, S Valverde

Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 77 (2 …, 2008

Cited by 410

Data completeness—the Achilles heel of drug-target networks

J Mestres, E Gregori-Puigjane, S Valverde, RV Sole

Nature biotechnology 26 (9), 983-984, 2008

Cited by 321

Spontaneous emergence of modularity in cellular networks

RV Solé, S Valverde

Journal of The Royal Society Interface 5 (18), 129-133, 2008

Cited by 130

Topological efficiency in three-dimensional gallery networks of termite nests

A Perna, S Valverde, J Gautrais, C Jost, R Solé, P Kuntz, G Theraulaz

Physica A: Statistical Mechanics and its Applications 387 (24), 6235-6244, 2008

Cited by 81

Simple quasispecies models for the survival-of-the-flattest effect: The role of space

J Sardanyés, SF Elena, RV Solé

Journal of Theoretical Biology 250 (3), 560-568, 2008

Cited by 60

Cancer stem cells as the engine of unstable tumor progression

RV Solé, C Rodríguez-Caso, TS Deisboeck, J Saldaña

Journal of theoretical biology 253 (4), 629-637, 2008

Cited by 54

Neutrality and robustness in evo-devo: emergence of lateral inhibition

A Munteanu, RV Sole

PLoS computational biology 4 (11), e1000226, 2008

Cited by 44

Superdiffusion and encounter rates in diluted, low dimensional worlds

F Bartumeus, P Fernández, MGE Da Luz, J Catalan, RV Solé, SA Levin

The European Physical Journal Special Topics 157 (1), 157-166, 2008

Cited by 41

Models of protocell replication

RV Solé, J Macía, H Fellermann, A Munteanu, J Sardanyés, S Valverde

Cited by 15

Nested subgraphs of complex networks

B Corominas-Murtra, JFF Mendes, RV Solé

Journal of Physics A: Mathematical and Theoretical 41 (38), 385003, 2008

Cited by 10

Topological vulnerability of the European power grid under errors and attacks

M Rosas-Casals, S Valverde, RV Solé

International journal of bifurcation and chaos 17 (07), 2465-2475, 2007

Cited by 446

Topology and evolution of technology innovation networks

S Valverde, RV Solé, MA Bedau, N Packard

Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 76 (5 …, 2007

Cited by 199

Synthetic protocell biology: from reproduction to computation

RV Solé, A Munteanu, C Rodriguez-Caso, J Macía

Philosophical Transactions of the Royal Society B: Biological Sciences 362 …, 2007

Cited by 192

Self-organization versus hierarchy in open-source social networks

S Valverde, RV Solé

Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 76 (4 …, 2007

Cited by 147

Scaling laws in the drier

R Solé

Nature 449 (7159), 151-153, 2007

Cited by 87

Life cycle of a minimal protocell—a dissipative particle dynamics study

H Fellermann, S Rasmussen, HJ Ziock, RV Solé

Artificial Life 13 (4), 319-345, 2007

Cited by 78

Generic Darwinian selection in catalytic protocell assemblies

A Munteanu, CSO Attolini, S Rasmussen, H Ziock, RV Solé

Philosophical Transactions of the Royal Society B: Biological Sciences 362 …, 2007

Cited by 43

Spatio-temporal dynamics in simple asymmetric hypercycles under weak parasitic coupling

J Sardanyés, RV Solé

Physica D: Nonlinear Phenomena 231 (2), 116-129, 2007

Cited by 40

Minimal model of self-replicating nanocells: a physically embodied information-free scenario

H Fellermann, RV Solé

Philosophical Transactions of the Royal Society B: Biological Sciences 362 …, 2007

Cited by 39

Protocell self-reproduction in a spatially extended metabolism–vesicle system

J Macía, RV Solé

Journal of theoretical biology 245 (3), 400-410, 2007

Cited by 38

Synthetic Turing protocells: vesicle self-reproduction through symmetry-breaking instabilities

J Macía, RV Solé

Philosophical Transactions of the Royal Society B: Biological Sciences 362 …, 2007

Cited by 36

Neutral fitness landscapes in signalling networks

P Fernández, RV Solé

Journal of The Royal Society Interface 4 (12), 41-47, 2007

Cited by 33

Delayed transitions in non-linear replicator networks: about ghosts and hypercycles

J Sardanyés, RV Solé

Chaos, Solitons & Fractals 31 (2), 305-315, 2007

Cited by 23

The role of cooperation and parasites in non-linear replicator delayed extinctions

J Sardanyés, RV Solé

Chaos, solitons & fractals 31 (5), 1279-1296, 2007

Cited by 22

Red Queen strange attractors in host–parasite replicator gene-for-gene coevolution

J Sardanyés, RV Solé

Chaos, Solitons & Fractals 32 (5), 1666-1678, 2007

Cited by 19

CHAOTIC STABILITY IN SPATIALLY-RESOLVED HOST-PARASITE REPLICATORS: THE RED QUEEN ON A LATTICE

J Sardanyés, RV SolE

International Journal of Bifurcation and Chaos 17 (02), 589-606, 2007

Cited by 11

K-scaffold subgraphs of complex networks

B Corominas-Murtra, S Valverde, C Rodriguez-Caso, RV Solé

EPL (Europhysics Letters) 77 (1), 18004, 2007

Cited by 8

Consciousness, brains and the replica problem

RV Solé

arXiv preprint arXiv:0712.1126, 2007

Ecological networks and their fragility

JM Montoya, SL Pimm, RV Solé

Nature 442 (7100), 259-264, 2006

Cited by 1755

Self-Organization in Complex Ecosystems

RV Solé, J Bascompte

Princeton University Press, 2006

Cited by 725

Topological patterns in street networks of self-organized urban settlements

J Buhl, J Gautrais, N Reeves, RV Solé, S Valverde, P Kuntz, G Theraulaz

The European Physical Journal B 49 (4), 513-522, 2006

Cited by 409

The fittest versus the flattest: experimental confirmation of the quasispecies effect with subviral pathogens

FM Codoñer, JA Darós, RV Solé, SF Elena

PLoS pathogens 2 (12), e136, 2006

Cited by 231

Are network motifs the spandrels of cellular complexity?

RV Solé, S Valverde

Trends in ecology & evolution 21 (8), 419-422, 2006

Cited by 131

Biodiversity loss and ecological network structure

J Memmott, D Alonso, E Berlow, A Dobson, JA Dunne, R Solé, J Weitz

Ecological networks: linking structure to dynamics in food webs, 325-347, 2006

Cited by 88

Self-organization patterns in wasp and open source communities

S Valverde, G Theraulaz, J Gautrais, V Fourcassié, RV Solé

IEEE Intelligent Systems 21 (2), 36-40, 2006

Cited by 72

Bifurcations and phase transitions in spatially extended two-member hypercycles

J Sardanyés, RV Solé

Journal of Theoretical Biology 243 (4), 468-482, 2006

Cited by 58

Complex networks in genomics and proteomics

RV Solé, R Pastor-Satorras

Handbook of graphs and networks: From the genome to the internet, 2006

Cited by 58

The role of computation in complex regulatory networks

P Fernández, RV Solé

Power laws, scale-free networks and genome biology, 206-225, 2006

Cited by 56

Pattern formation in noisy self-replicating spots

A Munteanu, RV Solé

International Journal of Bifurcation and Chaos 16 (12), 3679-3685, 2006

Cited by 53

Phenotypic diversity and chaos in a minimal cell model

A Munteanu, RV Sole

Journal of theoretical biology 240, 434-442, 2006

Cited by 50

Ghosts in the origins of life?

J Sardanyés, RV Solé

International Journal of Bifurcation and Chaos 16 (09), 2761-2765, 2006

Cited by 41

Information catastrophe in RNA viruses through replication thresholds

RV Solé, J Sardanyés, J Díez, A Mas

Journal of theoretical biology 240 (3), 353-359, 2006

Cited by 36

On the nature of design

S Valverde, RV Solé

Complex engineered systems: Science meets technology, 72-100, 2006

Cited by 9

Network motifs in computational graphs: A case study in software architecture

S Valverde, RV Solé

Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 72 (2 …, 2005

Cited by 180

Topology, tinkering and evolution of the human transcription factor network

C Rodriguez‐Caso, MA Medina, RV Sole

The FEBS journal 272 (24), 6423-6434, 2005

Cited by 86

Logarithmic growth dynamics in software networks

S Valverde, RV Solé

EPL (Europhysics Letters) 72 (5), 858-864, 2005

Cited by 76

Syntax for free?

R Solé

Nature 434 (7031), 289-289, 2005

Cited by 71

Gap percolation in rainforests

RV Solé, F Bartumeus, JGP Gamarra

Oikos 110 (1), 177-185, 2005

Cited by 26

Competition and introduction regime shape exotic bird communities in Hawaii

JGP Gamarra, JM Montoya, D Alonso, RV Sole

Biological Invasions 7 (2), 297-307, 2005

Cited by 20

Information theory of complex networks: On evolution and architectural constraints

RV Solé, S Valverde

Lecture Notes in Physics 650, 189-207, 2004

Cited by 490

Patterns in syntactic dependency networks

R Ferrer i Cancho, RV Solé, R Köhler

Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 69 (5 …, 2004

Cited by 449

Efficiency and robustness in ant networks of galleries

J Buhl, J Gautrais, RV Solé, P Kuntz, S Valverde, JL Deneubourg, ...

The European Physical Journal B 42 (1), 123-129, 2004

Cited by 195

An error catastrophe in cancer?

RV Solé, TS Deisboeck

Journal of Theoretical Biology 228 (1), 47-54, 2004

Cited by 156

Habitat fragmentation and biodiversity collapse in neutral communities

RV Solé, D Alonso, J Saldaña

Ecological complexity 1 (1), 65-75, 2004

Cited by 119

Analytic solution of Hubbell's model of local community dynamics

AJ McKane, D Alonso, RV Solé

Theoretical Population Biology 65 (1), 67-73, 2004

Cited by 119

The large-scale organization of chemical reaction networks in astrophysics

RV Solé, A Munteanu

EPL (Europhysics Letters) 68 (2), 170-176, 2004

Cited by 83

Internet’s critical path horizon

S Valverde, RV Solé

The European Physical Journal B 38 (2), 245-252, 2004

Cited by 67

Least effort and the origins of scaling in human language

RFI Cancho, RV Solé

Proceedings of the National Academy of Sciences 100 (3), 788-791, 2003

Cited by 610

Evolving protein interaction networks through gene duplication

R Pastor-Satorras, E Smith, RV Solé

Journal of Theoretical biology 222 (2), 199-210, 2003

Cited by 507

Hierarchical small worlds in software architecture

S Valverde, RV Solé

arXiv preprint cond-mat/0307278, 2003

Cited by 253

Optimization in complex networks

R Ferrer-i-Cancho, R. and Solé

Statistical mechanics of complex networks, 114-126, 2003

Cited by 249

Least effort and the origins of scaling in human language

R Ferrer i Cancho, RV Solé

Proceedings of the National Academy of Sciences of the United States of …, 2003

Cited by 240

Topological properties of food webs: from real data to community assembly models

JM Montoya, RV Solé

Oikos 102 (3), 614-622, 2003

Cited by 212

Adaptive walks in a gene network model of morphogenesis: insights into the Cambrian explosion

RV Solé, P Fernandez, SA Kauffman

International journal of developmental biology 47 (7-8), 685-693, 2003

Cited by 96

Phase transitions in unstable cancer cell populations

RV Solé

The European Physical Journal B-Condensed Matter and Complex Systems 35 (1 …, 2003

Cited by 68

Coinfection and superinfection in RNA virus populations: a selection–mutation model

J Saldana, SF Elena, RV Solé

Mathematical Biosciences 183 (2), 135-160, 2003

Cited by 54

On the origin of plankton patchiness

JMG Vilar, RV Solé, JM Rubı

Physica A: Statistical Mechanics and its Applications 317 (1-2), 239-246, 2003

Cited by 50

Signs of life: How complexity pervades biology

RV Solé, BC Goodwin

Basic Books, New York, 2002

Cited by 840

Scale-free networks from optimal design

S Valverde, R Ferrer, RV Sole

EPL (Europhysics Letters) 60, 512, 2002

Cited by 502

A model of large-scale proteome evolution

RV Sole, RP Satorras, E Smith, TB Kepler

Advances in Complex Systems 5 (01), 43-54, 2002

Cited by 444

Spatial patterns in ant colonies

G Theraulaz, E Bonabeau, SC Nicolis, RV Solé, V Fourcassié, S Blanco, ...

Proceedings of the National Academy of Sciences 99 (15), 9645-9649, 2002

Cited by 292

Selection, tinkering, and emergence in complex networks

RV Solé, R Ferrer‐Cancho, JM Montoya, S Valverde

Complexity 8 (1), 20-33, 2002

Cited by 254

Metapopulation dynamics and spatial heterogeneity in cancer

I González-García, RV Solé, J Costa

Proceedings of the National Academy of Sciences 99 (20), 13085-13089, 2002

Cited by 240

The Biosphere as a Complex Adaptive System: Preface

RV Solé, S Levin

Philosophical Transactions of the Royal Society of London. Series B …, 2002

Cited by 182

Self–organized instability in complex ecosystems

RV Solé, D Alonso, A McKane

Philosophical Transactions of the Royal Society of London. Series B …, 2002

Cited by 173

Recovery after mass extinction: evolutionary assembly in large–scale biosphere dynamics

RV Solé, JM Montoya, DH Erwin

Philosophical Transactions of the Royal Society of London. Series B …, 2002

Cited by 139

Self-organized critical traffic in parallel computer networks

S Valverde, RV Solé

Physica A: Statistical Mechanics and its Applications 312 (3-4), 636-648, 2002

Cited by 134

Zipf's law and random texts

RF CANCHO, RV Solé

Advances in Complex Systems 5 (01), 1-6, 2002

Cited by 99

Does natural selection organize ecosystems for the maintenance of high productivity and diversity?

E Giles Leigh Jr, GJ Vermeij

Philosophical Transactions of the Royal Society of London. Series B …, 2002

Cited by 61

Scaling in the growth of geographically subdivided populations: invariant patterns from a continent-wide biological survey

TH Keitt, LAN Amaral, SV Buldyrev, HE Stanley

Philosophical Transactions of the Royal Society of London. Series B …, 2002

Cited by 52

Spatial forecasting: Detecting determinism from single snapshots

P Marcos-Nikolaus, JM Martin-Gonzalez, RV Solé

International Journal of Bifurcation and Chaos 12 (02), 369-376, 2002

Cited by 36

Common pattern formation, modularity and phase transitions in a gene network model of morphogenesis

RV Solé, I Salazar-Ciudad, J Garcia-Fernández

Physica A: Statistical Mechanics and its Applications 305 (3-4), 640-654, 2002

Cited by 34

Complex discrete dynamics from simple continuous population models

JGP Gamarra, RV Solé

Bulletin of Mathematical Biology 64 (3), 611-620, 2002

Cited by 31

Task partitioning in a ponerine ant

G Theraulaz, E Bonabeau, RV Sole, B Schatz, JL Deneubourg

Journal of theoretical biology 215 (4), 481-489, 2002

Cited by 19

Modelling macroevolutionary patterns: An ecological perspective

RV Solé

Biological evolution and statistical physics, 312-337, 2002

Cited by 17

Controlling chaos in unidimensional maps using macroevolutionary algorithms

J Marín, RV Solé

Physical Review E 65 (2), 026207, 2002

Cited by 13

The small world of human language

R Ferrer i Cancho, RV Solé

Roy. Soc. London B 268, 2261, 2001

Cited by 1580

Complexity and fragility in ecological networks

RV Sole, M Montoya

Proceedings of the Royal Society of London. Series B: Biological Sciences …, 2001

Cited by 1073

Topology of technology graphs: Small world patterns in electronic circuits

RF i Cancho, C Janssen, RV Solé

Physical Review E 64 (4), 046119, 2001

Cited by 330

Two Regimes in the Frequency of Words and the Origins of Complex Lexicons: Zipf’s Law Revisited∗

R Ferrer i Cancho, RV Solé

Journal of Quantitative Linguistics 8 (3), 165-173, 2001

Cited by 322

Information transfer and phase transitions in a model of internet traffic

RV Solé, S Valverde

Physica A: Statistical Mechanics and its Applications 289 (3-4), 595-605, 2001

Cited by 262

Phenotypic and dynamical transitions in model genetic networks

I Salazar‐Ciudad, SA Newman, RV Solé

Evolution & development 3 (2), 84-94, 2001

Cited by 146

Orden y caos en sistemas complejos: fundamentos

R Sole, S Manrubia

Universitat Politècnica de Catalunya, 2001

Cited by 139

Scaling in ecological size spectra

J Camacho, RV Solé

EPL (Europhysics Letters) 55, 774, 2001

Cited by 63

Model of droplet dynamics in the Argentine ant Linepithema humile (Mayr)

G Theraulaz, E Bonabeau, C Sauwens, JL Deneubourg, A Lioni, F Libert, ...

Bulletin of Mathematical Biology 63 (6), 1079-1093, 2001

Cited by 54

La arquitectura de la naturaleza: complejidad y fragilidad en redes ecológicas

JM Montoya, RV Solé, MA Rodríguez

Ecosistemas 10 (2), 2001

Cited by 53

Field theory for a reaction-diffusion model of quasispecies dynamics

R Pastor-Satorras, RV Solé

Physical Review E 64 (5), 051909, 2001

Cited by 44

Multiple infection dynamics has pronounced effects on the fitness of RNA viruses

R Miralles, R Ferrer, RV Solé, A Moya, SF Elena

Journal of Evolutionary Biology 14 (4), 654-662, 2001

Cited by 40

Control, synchrony and the persistence of chaotic populations

JGP Gamarra, RV Solé, D Alonso

Chaos, Solitons & Fractals 12 (2), 235-249, 2001

Cited by 33

Neural networks as sources of chaotic motor activity in ants

O Miramontes, RV Sole, BC Goodwin

International Journal of Bifurcation and Chaos 11 (06), 1655-1664, 2001

Cited by 18

On the fractal nature of ecological and macroevolutionary dynamics

RV Solé, D Alonso, J Bascompte, SC Manrubia

Fractals 9 (01), 1-16, 2001

Cited by 16

Small world patterns in food webs

JM Montoya, RV Sole

Journal of Theoretical Biology, 2000

Cited by 875

Lyapunov exponents in random Boolean networks

B Luque, RV Solé

Physica A: Statistical Mechanics and its Applications 284 (1-4), 33-45, 2000

Cited by 144

Gene networks capable of pattern formation: from induction to reaction–diffusion

I Salazar, J Garcia-Fernandez, RV Sole

Journal of theoretical biology 205 (4), 587-603, 2000

Cited by 119

Mean-field stochastic theory for species-rich assembled communities

A McKane, D Alonso, RV Solé

Physical Review E 62 (6), 8466, 2000

Cited by 110

Pattern formation and optimization in army ant raids

RV Sole, E Bonabeau, J Delgado, P Fernández, J Marın

Artificial Life 6 (3), 219-226, 2000

Cited by 89

The DivGame simulator: a stochastic cellular automata model of rainforest dynamics

D Alonso, RV Sole

Ecological Modelling 133 (1-2), 131-141, 2000

Cited by 78

Bifurcations and chaos in ecology: lynx returns revisited

JGP Javier GP Gamarra, RV Solé

Ecology Letters 3 (2), 114-121, 2000

Cited by 58

Self-synchronization and task fulfilment in ant colonies

J Delgado, RV Sole

Journal of theoretical biology 205 (3), 433-441, 2000

Cited by 55

Scaling in a network model of a multispecies ecosystem

RV Solé, D Alonso, A McKane

Physica A: Statistical Mechanics and its Applications 286 (1-2), 337-344, 2000

Cited by 44

Extinctions and taxonomy in a trophic model of coevolution

J Camacho, RV Solé

Physical Review E 62 (1), 1119, 2000

Cited by 20

Gene network dynamics and the evolution of development

RV Solé, SA Newman

Trends in Ecology & Evolution 15 (12), 479-480, 2000

Cited by 14

Margalef y el espacio o porqué los ecosistemas no bailan sobre la punta de una aguja

J Bascompte, R Solé

Red Ecosistemas, 2000

Cited by 6

Criticality and scaling in evolutionary ecology

RV Solé, SC Manrubia, M Benton, S Kauffman, P Bak

Trends in ecology & evolution 14 (4), 156-160, 1999

Cited by 257

Macroevolutionary algorithms: a new optimization method on fitness landscapes

J Marin, RV Sole

IEEE Transactions on Evolutionary Computation 3 (4), 272-286, 1999

Cited by 116

Red queen dynamics, competition and critical points in a model of RNA virus quasispecies

RV Solé, R Ferrer, I González-Garcı́a, J Quer, E Domingo

Journal of Theoretical Biology 198 (1), 47-59, 1999

Cited by 90

Controlling chaos in ecology: from deterministic to individual-based models

RV Solé, JGP Gamarra, M Ginovart, D López

Bulletin of Mathematical Biology 61 (6), 1187-1207, 1999

Cited by 87

Transient dynamics and scaling phenomena in urban growth

SC Manrubia, DH Zanette, RV Sole

Fractals 7 (01), 1-8, 1999

Cited by 64

Phase transition in random networks with multiple states

RV Solé, B Luque, S Kauffman

arXiv preprint adap-org/9907011, 1999

Cited by 62

Patterns of extinction and biodiversity in the fossil record

RV Solé, M Newman

The Earth system: biological and ecological dimensions of global …, 1999

Cited by 37

Statistical measures of complexity for strongly interacting systems

RV Sole, B Luque

arXiv preprint adap-org/9909002, 1999

Cited by 20

Noise and periodic modulations in neural excitable media

JMG Vilar, RV Solé, JM Rubi

Physical Review E 59 (5), 5920, 1999

Cited by 12

Self-organized criticality in ecology and evolution: a reply to Fukami et al

RV Sole, SC Manrubia, MJ Benton, S Kauffman, P Bak

Trends in Ecology & Evolution 14 (8), 321-322, 1999

Cited by 3

Modeling spatiotemporal dynamics in ecology

R Bascompte, J. and Solé

Springer, 1998

Cited by 247

Effects of habitat destruction in a prey–predator metapopulation model

J Bascompte, RV Solé

Journal of Theoretical Biology 195 (3), 383-393, 1998

Cited by 152

Effects of noise in symmetric two-species competition

JMG Vilar, RV Solé

Physical review letters 80 (18), 4099, 1998

Cited by 117

Spatiotemporal patterns in nature

J Bascompte, RV Solé

Elsevier, 1998

Cited by 103

Chaos, dispersal and extinction in coupled ecosystems

RJGPG Solé

Journal of Theoretical Biology, 1998

Cited by 32

Stable core and chaos control in random Boolean networks

B Luque, RV Solé

Journal of Physics A: Mathematical and General 31 (6), 1533-1537, 1998

Cited by 28

Random walks, fractals and the origins of rainforest diversity

RV Solé, D Alonso

Advances in Complex Systems 1 (02n03), 203-220, 1998

Cited by 23

Long-range correlations in the fossil record and the fractal nature of macroevolution

RS al.

Advances in Complex Systems 1, 255-266, 1998

Cited by 22

Mean-field theory of fluid neural networks

J Delgado, RV Solé

Physical Review E 57 (2), 2204, 1998

Cited by 13

Long-range correlations in the fossil record and the fractal nature of macroevolution

Sole, R.V., Manrubia, S.C., Pérez-Mercader, J., Benton, M. and Bak, P.

Advances in Complex Systems 1, 255-266, 1998

Self-similarity of extinction statistics in the fossil record

RV Sole, SC Manrubia, M Benton, P Bak

Nature 388 (6644), 764-767, 1997

Cited by 267

Phase transitions in random networks: Simple analytic determination of critical points

B Luque, RV Solé

Physical Review E 55 (1), 257, 1997

Cited by 154

Population cycles and spatial patterns in snowshoe hares: an individual-oriented simulation

J Bascompte, RV Solé, N Martı́nez

Journal of theoretical Biology 187 (2), 213-222, 1997

Cited by 48

On forest spatial dynamics with gap formation

SC Manrubia, RV Solé

Journal of theoretical biology 187 (2), 159-164, 1997

Cited by 45

Collective-induced computation

J Delgado, RV Solé

Physical Review E 55 (3), 2338, 1997

Cited by 43

Controlling chaos in random Boolean networks

B Luque, RV Solé

EPL (Europhysics Letters) 37 (9), 597, 1997

Cited by 37

Noise induced transitions in fluid neural networks

J Delgado, RV Solé

Physics Letters A 229 (3), 183-189, 1997

Cited by 17

Habitat fragmentation and extinction thresholds in spatially explicit models

J Bascompte, RV Solé

Journal of Animal ecology, 465-473, 1996

Cited by 560

Extinction and self-organized criticality in a model of large-scale evolution

RV Solé, SC Manrubia

Physical Review E 54 (1), R42, 1996

Cited by 245

Phase transitions and complex systems

RV Solé, SC Manrubia, B Luque, J Delgado, J Bascompte

Complexity 1 (4), 13-26, 1996

Cited by 205

Are critical phenomena relevant to large-scale evolution?

RV Solé, J Bascompte

Proceedings of the Royal Society of London. Series B: Biological Sciences …, 1996

Cited by 110

Extinction: bad genes or weak chaos?

RV Solé, J Bascompte, SC Manrubia

Proceedings of the Royal Society of London. Series B: Biological Sciences …, 1996

Cited by 64

Self-organized criticality in rainforest dynamics

SC Manrubia, RV Solé

Chaos, Solitons & Fractals 7 (4), 523-541, 1996

Cited by 41

Complejidad en la frontera del caos

JD Pin, RV Solé, JB Sacrest, BL Serrano, SC Manrubia

Investigación y ciencia, 14-21, 1996

Cited by 31

Universal computation in fluid neural networks

RV Solé, J Delgado

Complexity 2 (2), 49-56, 1996

Cited by 23

On macroevolution, extinctions and critical phenomena

RV Solé

Complexity 1 (6), 40-44, 1996

Cited by 20

Rethinking complexity: modelling spatiotemporal dynamics in ecology

J Bascompte, RV Solé

Trends in Ecology & Evolution 10 (9), 361-366, 1995

Cited by 273

Are rainforests self-organized in a critical state?

RV Solé, SC Manrubia

Journal of Theoretical Biology 173 (1), 31-40, 1995

Cited by 224

Information at the edge of chaos in fluid neural networks

RV Solé, O Miramontes

Physica D: Nonlinear Phenomena 80 (1-2), 171-180, 1995

Cited by 81

Phase transitions and antichaos in generalized Kauffman networks

RV Solé, B Luque

Physics Letters A 196 (5-6), 331-334, 1995

Cited by 63

Self-similarity in rain forests: Evidence for a critical state

RV Solé, SC Manrubia

Physical review E 51 (6), 6250, 1995

Cited by 59

Measuring chaos from spatial information

RV Solé, J Bascompte

J. theor. Biol. (1995) 175, 139–147, 1995

Cited by 41

Controlling chaos in discrete neural networks

RV Solé, LM de la Prida

Physics Letters A 199 (1-2), 65-69, 1995

Cited by 41

Spatially induced bifurcations in single-species population dynamics

J Bascompte, RV Solé

Journal of Animal Ecology, 256-264, 1994

Cited by 113

Ecological chaos

RV Solé, J Bascompte

Nature 367 (6462), 418-418, 1994

Cited by 12

Oscillations and chaos in ant societies

RV Solé, O Miramontes, BC Goodwin

Journal of theoretical Biology 161 (3), 343-357, 1993

Cited by 159

Collective behaviour of random-activated mobile cellular automata

O Miramontes, RV Solé, BC Goodwin

Physica D: Nonlinear Phenomena 63 (1-2), 145-160, 1993

Cited by 69

Emergent behavior in insect societies: Global oscillations, chaos and computation

RV Solé, O Miramontes, BC Goodwin

Interdisciplinary approaches to nonlinear complex systems, 77-88, 1993

Cited by 31

Multifractals in rainforest ecosystems: modelling and simulation

RV Solé, SC Manrubia, B Luque

Proceedings of the Second IFIP Working Conference on Fractals in the Natural …, 1993

Cited by 12

Chaotic turing structures

RV Solé, J Bascompte

Physics Letters A 179 (4-5), 325-331, 1993

Cited by 11

Spiral waves, chaos and multiple attractors in lattice models of interacting populations

RV Sole, J Valls, J Bascompte

Physics Letters A 166 (2), 123-128, 1992

Cited by 119

Nonequilibrium dynamics in lattice ecosystems: chaotic stability and dissipative structures

RV Solé, J Bascompte, J Valls

Chaos: An Interdisciplinary Journal of Nonlinear Science 2 (3), 387-395, 1992

Cited by 87

Stability and complexity of spatially extended two-species competition

RV Solé, J Bascompte, J Valls

Journal of theoretical Biology 159 (4), 469-480, 1992

Cited by 86

On structural stability and chaos in biological systems

RV Solé, J Valls

Journal of theoretical Biology 155 (1), 87-102, 1992

Cited by 76

Self-organized criticality in Monte Carlo simulated ecosystems

RV Solé, D López, M Ginovart, J Valls

Physics Letters A 172 (1-2), 56-61, 1992

Cited by 21

Nonlinear phenomena and chaos in a Monte Carlo simulated microbial ecosystem

RV Solé, J Valls

Bulletin of mathematical biology 54 (6), 939-955, 1992

Cited by 11

Order and chaos in a 2D Lotka-Volterra coupled map lattice

RV Solé, J Valls

Physics Letters A 153 (6-7), 330-336, 1991

Cited by 45

Characterization of spatiotemporal chaos from macroscopic measures

RV Solé, J Valls

Physics Letters A 161 (3), 241-246, 1991

Cited by 6

Energy flow-networks and the maximum entropy formalism

J Wagensberg, A García, RV SolÈ

Maximum Entropy and Bayesian Methods: Laramie, Wyoming, 1990, 253-264, 1991

Cited by 5

FLOW-NETWORK ORGANIZATION IN ECOSVSTEMS ANO THE MATHEMATICAL THEORV OF INFORMATION

J Wagensberg, RV Solé, A García

Oecologia aquatica 10 (10), 387-391, 1991

Connectivity and information transfer in flow networks: Two magic numbers in ecology?

J Wagensberg, A Garcia, RV Sole

Bulletin of mathematical biology 52 (6), 733-740, 1990

Cited by 31

Synthetic soil crusts against green-desert transitions: A spatial model: Synthetic ecosystems terraformation

B Vidiella, J Sardanyés, RV Solé

Royal Society Publishing, 0

A morphospace for synthetic organs and organoids: the possible and the actual

R Sole

Do plants have the cognitive complexity for sentience?

R Solé